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1.
MethodsX ; 12: 102641, 2024 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-38510934

RESUMO

Artificial snake hibernacula are anthropogenic structures used by snakes in temperate zones to survive harsh winter conditions. Artificial hibernacula can be intentionally created for various purposes including herpetoculture, research, habitat enhancement and conservation, or to offset development impacts. Here we present a design for an artificial snake hibernaculum for research use that was convenient (manually installed) and cost-effective ($91 CAD ea.). The hibernaculum was made of HDPE and ABS plumbing hardware, and measured ∼160 cm long by ∼10 cm wide. Our design was multi-chambered, descended to the groundwater table, and was modelled after the burrowing crayfish burrows used as overwinter refugia by snakes in our study area. Installation was completed using a manual soil auger in areas with soil depths of ∼115 cm. Removable components would allow easy ingress and egress of snakes, and threaded caps would facilitate monitoring via borescope camera. Dataloggers were used in 4 unoccupied hibernacula during one hibernation period, and results demonstrated that hibernacula supported a low mean air temperature and a high mean relative humidity. The hibernacula also provided a substantial buffer against extreme outside temperature and humidity. Further testing may demonstrate the suitability of our hibernaculum design for herpetoculture or conservation purposes.•Installed using a manual soil auger in areas with soil depths of ∼115 cm•Removable components allow for safe and easy ingress/egress of wild-caught or captive-reared snakes•Removable cap and simplified shape facilitate health monitoring of snakes via borescope camera.

2.
BMC Microbiol ; 21(1): 340, 2021 12 13.
Artigo em Inglês | MEDLINE | ID: mdl-34903181

RESUMO

BACKGROUND: Bilophila wadsworthia, a strictly anaerobic, sulfite-reducing bacterium and common member of the human gut microbiota, has been associated with diseases such as appendicitis and colitis. It is specialized on organosulfonate respiration for energy conservation, i.e., utilization of dietary and host-derived organosulfonates, such as taurine (2-aminoethansulfonate), as sulfite donors for sulfite respiration, producing hydrogen sulfide (H2S), an important intestinal metabolite that may have beneficial as well as detrimental effects on the colonic environment. Its taurine desulfonation pathway involves the glycyl radical enzyme (GRE) isethionate sulfite-lyase (IslAB), which cleaves isethionate (2-hydroxyethanesulfonate) into acetaldehyde and sulfite. RESULTS: We demonstrate that taurine metabolism in B. wadsworthia 3.1.6 involves bacterial microcompartments (BMCs). First, we confirmed taurine-inducible production of BMCs by proteomic, transcriptomic and ultra-thin sectioning and electron-microscopical analyses. Then, we isolated BMCs from taurine-grown cells by density-gradient ultracentrifugation and analyzed their composition by proteomics as well as by enzyme assays, which suggested that the GRE IslAB and acetaldehyde dehydrogenase are located inside of the BMCs. Finally, we are discussing the recycling of cofactors in the IslAB-BMCs and a potential shuttling of electrons across the BMC shell by a potential iron-sulfur (FeS) cluster-containing shell protein identified by sequence analysis. CONCLUSIONS: We characterized a novel subclass of BMCs and broadened the spectrum of reactions known to take place enclosed in BMCs, which is of biotechnological interest. We also provided more details on the energy metabolism of the opportunistic pathobiont B. wadsworthia and on microbial H2S production in the human gut.


Assuntos
Bilophila/metabolismo , Bilophila/ultraestrutura , Ácido Isetiônico/metabolismo , Taurina/metabolismo , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Bilophila/genética , Compartimento Celular , Microbioma Gastrointestinal , Perfilação da Expressão Gênica , Humanos , Sulfeto de Hidrogênio/metabolismo , Proteômica , Sulfitos/metabolismo
3.
Toxins (Basel) ; 13(9)2021 09 17.
Artigo em Inglês | MEDLINE | ID: mdl-34564670

RESUMO

Recurring blooms of filamentous, red-pigmented and toxin-producing cyanobacteria Planktothrix rubescens have been reported in numerous deep and stratified prealpine lakes, with the exception of Lake Constance. In a 2019 and 2020 Lake Constance field campaign, we collected samples from a distinct red-pigmented biomass maximum below the chlorophyll-a maximum, which was determined using fluorescence probe measurements at depths between 18 and 20 m. Here, we report the characterization of these deep water red pigment maxima (DRM) as cyanobacterial blooms. Using 16S rRNA gene-amplicon sequencing, we found evidence that the blooms were, indeed, contributed by Planktothrix spp., although phycoerythrin-rich Synechococcus taxa constituted most of the biomass (>96% relative read abundance) of the cyanobacterial DRM community. Through UPLC-MS/MS, we also detected toxic microcystins (MCs) in the DRM in the individual sampling days at concentrations of ≤1.5 ng/L. Subsequently, we reevaluated the fluorescence probe measurements collected over the past decade and found that, in the summer, DRM have been present in Lake Constance, at least since 2009. Our study highlights the need for a continuous monitoring program also targeting the cyanobacterial DRM in Lake Constance, and for future studies on the competition of the different cyanobacterial taxa. Future studies will address the potential community composition changes in response to the climate change driven physiochemical and biological parameters of the lake.


Assuntos
Monitoramento Ambiental/métodos , Proliferação Nociva de Algas , Lagos/microbiologia , Microcistinas/biossíntese , Microcistinas/toxicidade , Planktothrix/crescimento & desenvolvimento , Planktothrix/metabolismo , Alemanha
4.
PLoS One ; 13(4): e0194521, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-29641577

RESUMO

The Asian tiger mosquito Aedes albopictus became of public health concern as it can replicate and transmit viral and filarial pathogens with a strong invasive success over the world. Various strategies have been proposed to reduce mosquito population's vectorial capacity. Among them, symbiotic control of mosquito borne disease offers promising perspectives. Such method is likely to be affected by the dynamics of mosquito-associated symbiotic communities, which might in turn be affected by host genotype and environment. Our previous study suggested a correlation between mosquitoes' origin, genetic diversity and midgut bacterial diversity. To distinguish the impact of those factors, we have been studying the midgut bacterial microbiota of two Ae. albopictus populations from tropical (La Réunion) and temperate (Montpellier) origins under controlled laboratory conditions. the two populations experienced random mating or genetic bottleneck. Microbiota composition did not highlight any variation of the α and ß-diversities in bacterial communities related to host's populations. However, sizes of the mosquitoes were negatively correlated with the bacterial α-diversity of females. Variations in mosquito sex were associated with a shift in the composition of bacterial microbiota. The females' mosquitoes also exhibited changes in the microbiota composition according to their size and after experiencing a reduction of their genetic diversity. These results provide a framework to investigate the impact of population dynamics on the symbiotic communities associated with the tiger mosquito.


Assuntos
Aedes/genética , Aedes/microbiologia , Larva/fisiologia , Animais , Bactérias/genética , Cruzamentos Genéticos , DNA Intergênico , Meio Ambiente , Feminino , Variação Genética , Genótipo , Intestinos/microbiologia , Intestinos/fisiologia , Masculino , Microbiota , RNA Ribossômico 16S/genética , Ribossomos/metabolismo , Simbiose
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